Viash 0.9.7

Bug fix release

New Release
Author

Viash Team

Published

March 3, 2026

What’s new?

Fix a few issues with how Viash interacts with Nextflow and fix an issue with dependency resolving.

Full changelog

BUG FIXES

  • NextflowRunner: Fix readCsv failing on S3 paths with Nextflow 25.10.x (PR #864). The BufferedReader.ready() method returns false for S3 streams when no data is pre-buffered, which broke compatibility with AWS SDK v2 used in Nextflow 25.10.x.

  • Nextflowrunner: fix publishing of directories when the output file name template contains a trailing slash (PR #867).

  • Logging: Reduce log level for fetching repositories from info to debug (PR #871).

  • Dependencies: Fix an edge case during dependency resolving (PR #870). Local dependencies of dependencies of local dependencies were resolved incorrectly and resulted in a wrongly resolved destination path.